Service now return 406 if service exists but the content type is not
supported

Fixed use of previously returned values in classModule

Adding new format for ref:Resource

Delete old format

Move special/index to special/classes
Added special/namedGraphs

Instead of creating a new class, users only need to create a model and
view file called special.<COMMAND>.[view|model].extension  Thus, it is
possible to create new URL such as http://<HOMEURL>/special<COMMAND>

- Added "special" URIs where an API can be created -- Included an
abstract class from where these special URIs can be implemented --
Included a basic class that implements the abstract class -- So far,
only listing instances for a class is implemented - Root for website
redirection -- Now it goes to /special/index to list all classes - Moved
include of settings below in commons.inc.php so it can override values -
Created owl:Class and rdfs:Class' templates