Commit 32e21880 authored by Gonzalo S Nido's avatar Gonzalo S Nido
Browse files

Aaaand another small change

parent 39dc104d
......@@ -23,9 +23,9 @@ bowtie2="/usr/local/bin/bowtie2-2.4.41"
bowtie_path="/opt/bowtie2-2.4.41/"
samtools="/usr/local/bin/samtools-1.10"
samtools_path="/opt/samtools-1.10"
ext_chr_srt=$( realpath ${PIPELINEPATH}/apps/ext_chr_srt.py )
meth_prop=$( realpath ${PIPELINEPATH}/apps/methylation_proportion.py )
generate_bs_indices="./apps/generate_bs_indices.sh"
ext_chr_srt="${PIPELINEPATH}/apps/ext_chr_srt.py"
meth_prop="${PIPELINEPATH}/apps/methylation_proportion.py"
generate_bs_indices="${PIPELINEPATH}/apps/generate_bs_indices.sh"
psrecord="~/.local/bin/psrecord"
......
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