Explore projects

Species distribution models for ArtsApp. Based on https://github.com/joechip90/ArtsApp/ by Joseph Chipperfield.

Monitors, loggs and generate of 2D line plots using a Raspberry Pi 1-wire temperature sensors. Written in PHP and R.

R script for BIO299 - Bluemouth project

Analysis of cardiomyocite differentiation

Source code for the paper "Common gene expression signatures in Parkinson’s disease are driven by changes in cell composition"

Modeling material for Fish under stress research school and workshop @ Runde, June 2019.

Modeling material for Fish under stress research school and workshop @ Runde, June 2019.

Deletions in urine sediment of patients with mitochondrial deletions

mtDNA mappability changes following bisulfite treatment Association between methylation and depth

Source code for the paper "Ultra-deep whole genome bisulfite sequencing reveals a single methylation hotspot in human brain mitochondrial DNA"

Run RASflow on real data

Code for the manuscript "Single-nucleus transcriptomics reveals disease- and pathology-specific signatures in alpha-synucleinopathies" (Nido et al. 2023)

https://medrxiv.org/cgi/content/short/2023.10.10.23296642v1

Raw data: https://www.synapse.org/#!Synapse:syn52660694