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Dorothy.Dankel
dCod at Runde
Commits
9d63ef4f
Commit
9d63ef4f
authored
Jun 22, 2019
by
Morten Brun
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finalizing exercises
parent
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lecturers/morten/README.md
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@@ -26,8 +26,14 @@ validation and, if possible, to extract discriminating genes.
above for all the samples that have been left out.
*
Do the above multiple times and find the probability of the
prediction beeing correct.
*
Find the gene ids with the highest coefficient in the components for
the PCA. Do they discriminate the samples for different exposures?
Take a look at sparse PCA and discuss how it can be used to find
more relevant gene ids.
*
Figure out how to translate he gene ids to gene names.
*
Execute the remaining notebooks in the morten/python folder.
*
Analyze a new data set. Are you able to learn the exposures of the samples?
*
Analyze a data set of your own. Are you able to learn the exposures
of your samples?
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@@ -56,7 +62,7 @@ inform me if you figure out a way to do that.
Follow these
[
instructions
](
https://git-scm.com/book/en/v2/Getting-Started-Installing-Git
)
### Install depend
i
ncies
### Install depend
e
ncies
Navigate to this folder with the terminal or the Anaconda Promt. In the terminal/Promt type
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